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Resource CodeSystem/FHIR Server from package hl7.fhir.uv.molecular-definition-data-types#current (16 ms)

Package hl7.fhir.uv.molecular-definition-data-types
Type CodeSystem
Id Id
FHIR Version R6
Source http://hl7.org/fhir/uv/molecular-definition-data-types/https://build.fhir.org/ig/HL7/molecular-definition-data-types/CodeSystem-strand-orientation.html
Url http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/strand-orientation
Version 1.0.0-ballot1
Status draft
Date 2025-05-09T21:27:32+00:00
Name StrandOrientation
Title Strand Orientation
Experimental False
Realm uv
Authority hl7
Description Orientation of molecular sequences, indicating directionality for nucleotides (5' to 3' or 3' to 5') or amino acids (N to C terminus)
Content complete

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: CodeSystem strand-orientation

This case-sensitive code system http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/strand-orientation defines the following codes:

CodeDisplayDefinition
forward Forward strand5' to 3' for nucleotides or N-to-C for amino acids; also known as positive/plus strand. Single stranded sequences are conventionally represented in forward direction.
reverse Reverse strand3' to 5' orientation; also known as negative/minus strand. Applicable only to double stranded sequences.

Source

{
  "resourceType" : "CodeSystem",
  "id" : "strand-orientation",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: CodeSystem strand-orientation</b></p><a name=\"strand-orientation\"> </a><a name=\"hcstrand-orientation\"> </a><a name=\"strand-orientation-en-US\"> </a><p>This case-sensitive code system <code>http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/strand-orientation</code> defines the following codes:</p><table class=\"codes\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style=\"white-space:nowrap\">forward<a name=\"strand-orientation-forward\"> </a></td><td>Forward strand</td><td>5' to 3' for nucleotides or N-to-C for amino acids; also known as positive/plus strand. Single stranded sequences are conventionally represented in forward direction.</td></tr><tr><td style=\"white-space:nowrap\">reverse<a name=\"strand-orientation-reverse\"> </a></td><td>Reverse strand</td><td>3' to 5' orientation; also known as negative/minus strand. Applicable only to double stranded sequences.</td></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
      "valueCode" : "cg"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
      "valueInteger" : 0,
      "_valueInteger" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
          }
        ]
      }
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
      "valueCode" : "draft",
      "_valueCode" : {
        "extension" : [
          {
            "url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
            "valueCanonical" : "http://hl7.org/fhir/uv/molecular-definition-data-types/ImplementationGuide/hl7.fhir.uv.molecular-definition-data-types"
          }
        ]
      }
    }
  ],
  "url" : "http://hl7.org/fhir/uv/molecular-definition-data-types/CodeSystem/strand-orientation",
  "version" : "1.0.0-ballot1",
  "name" : "StrandOrientation",
  "title" : "Strand Orientation",
  "status" : "draft",
  "experimental" : false,
  "date" : "2025-05-09T21:27:32+00:00",
  "publisher" : "HL7 International / Clinical Genomics",
  "contact" : [
    {
      "name" : "HL7 International / Clinical Genomics",
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/clingenomics"
        },
        {
          "system" : "email",
          "value" : "cg@lists.HL7.org"
        }
      ]
    }
  ],
  "description" : "Orientation of molecular sequences, indicating directionality for nucleotides (5' to 3' or 3' to 5') or amino acids (N to C terminus)",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
          "code" : "001",
          "display" : "World"
        }
      ]
    }
  ],
  "caseSensitive" : true,
  "content" : "complete",
  "count" : 2,
  "concept" : [
    {
      "code" : "forward",
      "display" : "Forward strand",
      "definition" : "5' to 3' for nucleotides or N-to-C for amino acids; also known as positive/plus strand. Single stranded sequences are conventionally represented in forward direction."
    },
    {
      "code" : "reverse",
      "display" : "Reverse strand",
      "definition" : "3' to 5' orientation; also known as negative/minus strand. Applicable only to double stranded sequences."
    }
  ]
}

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